Databases

Data Mining

• Lemon: a framework for rapidly mining structural information from the Protein Data Bank (standalone)
  
  
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• PDBminer:
  
  
  

Databases

• EMDB: Electron Microscopy Data Bank
  
  
• PDB: The RCSB Protein Data Bank provides access to experimentally determined 3D structures from the PDB archive and computed structure models, offering tools for exploration, visualization, and analysis.
  
  
• PDBe:
  
  
• PDB-redo: Offers optimized versions of PDB entries through an automated procedure that refines, rebuilds, and validates structural models, combining popular crystallographic software with specially developed tools.