Docking and Scoring Function Benchmarks

  • BigBind and BayesBind:
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  • CASF: CASF offers benchmark packages for the assessment of scoring functions, with versions CASF-2016, CASF-2013, and CASF-2007 available for download upon registration.
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  • DEKOIS: Provides DEKOIS 2.0, a library of benchmark data sets for objective in silico screening.
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  • Disco: A default benchmark containing 95 targets selected from the DUD-E Targets list for docking datasets generation.
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  • Lit-PCBA: A dataset for virtual screening and machine learning with 15 target sets, 7761 actives, and 382674 unique inactives selected from high-confidence PubChem Bioassay data.
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  • MF-PCBA: A repository containing code for downloading, filtering, and assembling the MF-PCBA datasets for machine learning in drug discovery.
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  • MUDB-DecoyMaker2.0: A Python GUI application to generate maximal unbiased benchmarking sets data sets for virtual drug screening.
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  • TocoDDB:
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  • TocoDecoy: A new approach to design unbiased datasets for training and benchmarking machine-learning scoring functions.
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  • D-COID: Dataset of Congruent Inhibitors and Decoys
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  • Uni-Dock-Benchmarks:
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