ML+AI
- Auto3D: Automatic Generation of the Low-energy 3D Structures with ANI Neural Network Potentials (standalone).
- ConfGF:
- Conformer-RL: An open-source deep reinforcement learning library for conformer generation.
- COSMIC: COSMIC: Molecular Conformation Space Modeling in Internal Coordinates with an Adversarial Framework
- diffusion-conformer: Physics-informed generative model for drug-like molecule conformers
- DMCG:
- GeoDiff: GeoDiff introduces a geometric diffusion model aimed at generating molecular conformations, as detailed in their ICLR 2022 presentation.
- GeoMol:
- GINGER:
- Gypsum-DL: Gypsum-DL is a software that transforms 1D and 2D small-molecule representations into 3D models, considering various isomeric and conformational states.
- TensorVAE:
- Uni-Mol: Uni-Mol offers a universal 3D molecular pretraining framework, enhancing representation capacity and scope in drug design with superior performance in multiple prediction tasks.