Python
- CDPKit - CONFORT: High-Quality Conformer Generation (standalone).
- chemfunc:
- Chython: Library for processing molecules and reactions in python way.
- cinfony:
- ODDT: Open Drug Discovery Toolkit, toolkit for drug discovery (standalone)
- OpenBabel: toolkit for drug discovery, file format etc (standalone)
- RDKit: Scopy: an integrated negative design python library for desirable HTS/VS database design
- rdkit-scripts: rdkit scripts making life easier (standalone)
- useful-rdkit-utils: A collection of useful RDKit functions